Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

SMAD3 - SMAD family member 3

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
4088 ENSG00000166949 SMAD3 H3BVD1

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: SMAD3

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
DMDSMAD3activatesR-2966-0.0660624Pr-85
KRASSMAD3activatesR-2966-0.0660624Pr-85
NRASSMAD3activatesR-2966-0.0660624Pr-85
RNASeq_MAFA_CallSMAD3activatesR-2966-0.0660624Pr-85
t(14;16)SMAD3activatesR-2966-0.0660624Pr-85
ROBO2SMAD3activatesR-2966-0.0660624Pr-85
amp1qSMAD3activatesR-2966-0.0660624Pr-85
del13SMAD3activatesR-2966-0.0660624Pr-85
t(14;16)SMAD3activatesR-2958-0.582936Pr-6
amp1qSMAD3activatesR-2958-0.582936Pr-6
del13SMAD3activatesR-2958-0.582936Pr-6
ATMSMAD3repressesR-2962-0.592902Pr-122
CACNA1HSMAD3repressesR-2962-0.592902Pr-122
FLGSMAD3repressesR-2962-0.592902Pr-122
KRASSMAD3repressesR-2962-0.592902Pr-122
RNASeq_MAFA_CallSMAD3repressesR-2962-0.592902Pr-122
RNASeq_MAFB_CallSMAD3repressesR-2962-0.592902Pr-122
t(14;16)SMAD3repressesR-2962-0.592902Pr-122
SYNE2SMAD3repressesR-2962-0.592902Pr-122
t(14;16)_cytogeneticSMAD3repressesR-2962-0.592902Pr-122
ATMSMAD3activatesR-2960-0.759716Pr-90
CSMD1SMAD3activatesR-2960-0.759716Pr-90
DIS3SMAD3activatesR-2960-0.759716Pr-90
FLGSMAD3activatesR-2960-0.759716Pr-90
NRASSMAD3activatesR-2960-0.759716Pr-90
RNASeq_MAFA_CallSMAD3activatesR-2960-0.759716Pr-90
RNASeq_MAFB_CallSMAD3activatesR-2960-0.759716Pr-90
t(14;16)SMAD3activatesR-2960-0.759716Pr-90
t(4;14)SMAD3activatesR-2960-0.759716Pr-90
SYNE2SMAD3activatesR-2960-0.759716Pr-90
TRIOSMAD3activatesR-2960-0.759716Pr-90
amp1qSMAD3activatesR-2960-0.759716Pr-90
del1pSMAD3activatesR-2960-0.759716Pr-90
t(14;16)_cytogeneticSMAD3activatesR-2960-0.759716Pr-90
t(4;14)_cytogeneticSMAD3activatesR-2960-0.759716Pr-90
DIS3SMAD3repressesR-29611.18119Pr-117
FAM46CSMAD3repressesR-29611.18119Pr-117
IRF4SMAD3repressesR-29611.18119Pr-117
NRASSMAD3repressesR-29611.18119Pr-117
t(11;14)SMAD3repressesR-29611.18119Pr-117
RNASeq_FGFR3_CallSMAD3repressesR-29611.18119Pr-117
t(4;14)SMAD3repressesR-29611.18119Pr-117
del13SMAD3repressesR-29611.18119Pr-117
t(11;14)_cytogeneticSMAD3repressesR-29611.18119Pr-117
t(4;14)_cytogeneticSMAD3repressesR-29611.18119Pr-117
ATMSMAD3repressesR-29631.44668Pr-120
DIS3SMAD3repressesR-29631.44668Pr-120
FAM46CSMAD3repressesR-29631.44668Pr-120
IRF4SMAD3repressesR-29631.44668Pr-120
NRASSMAD3repressesR-29631.44668Pr-120
t(11;14)SMAD3repressesR-29631.44668Pr-120
RNASeq_FGFR3_CallSMAD3repressesR-29631.44668Pr-120
t(14;16)SMAD3repressesR-29631.44668Pr-120
t(4;14)SMAD3repressesR-29631.44668Pr-120
TRIOSMAD3repressesR-29631.44668Pr-120
t(11;14)_cytogeneticSMAD3repressesR-29631.44668Pr-120
t(4;14)_cytogeneticSMAD3repressesR-29631.44668Pr-120
ATMSMAD3repressesR-2967-1.98807Pr-139
DIS3SMAD3repressesR-2967-1.98807Pr-139
DMDSMAD3repressesR-2967-1.98807Pr-139
FLGSMAD3repressesR-2967-1.98807Pr-139
IRF4SMAD3repressesR-2967-1.98807Pr-139
KRASSMAD3repressesR-2967-1.98807Pr-139
NRASSMAD3repressesR-2967-1.98807Pr-139
RNASeq_MAFA_CallSMAD3repressesR-2967-1.98807Pr-139
RNASeq_MAFB_CallSMAD3repressesR-2967-1.98807Pr-139
t(14;16)SMAD3repressesR-2967-1.98807Pr-139
ROBO2SMAD3repressesR-2967-1.98807Pr-139
t(11;14)_cytogeneticSMAD3repressesR-2967-1.98807Pr-139
t(14;16)_cytogeneticSMAD3repressesR-2967-1.98807Pr-139
DMDSMAD3repressesR-29652.28284Pr-137
IRF4SMAD3repressesR-29652.28284Pr-137
NRASSMAD3repressesR-29652.28284Pr-137
t(11;14)SMAD3repressesR-29652.28284Pr-137
RNASeq_MAFA_CallSMAD3repressesR-29652.28284Pr-137
t(11;14)_cytogeneticSMAD3repressesR-29652.28284Pr-137
ATMSMAD3activatesR-2959-3.47323Pr-15
CACNA1HSMAD3activatesR-2959-3.47323Pr-15
CSMD1SMAD3activatesR-2959-3.47323Pr-15
NRASSMAD3activatesR-2959-3.47323Pr-15
RNASeq_MAFA_CallSMAD3activatesR-2959-3.47323Pr-15
t(14;16)SMAD3activatesR-2959-3.47323Pr-15
amp1qSMAD3activatesR-2959-3.47323Pr-15
del1pSMAD3activatesR-2959-3.47323Pr-15

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.