Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

- homeobox D3

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
ENSG00000128652 P31249

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator:

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
DIS3activatesR-22601.93906Pr-123
FGFR3activatesR-22601.93906Pr-123
LAMA1activatesR-22601.93906Pr-123
MUC16activatesR-22601.93906Pr-123
PRKD2activatesR-22601.93906Pr-123
RNASeq_FGFR3_CallactivatesR-22601.93906Pr-123
t(4;14)activatesR-22601.93906Pr-123
del13activatesR-22601.93906Pr-123
t(4;14)_cytogeneticactivatesR-22601.93906Pr-123
CYLDactivatesR-22593.22334Pr-108
DIS3activatesR-22593.22334Pr-108
FAT1activatesR-22593.22334Pr-108
FGFR3activatesR-22593.22334Pr-108
GPR98activatesR-22593.22334Pr-108
MAXactivatesR-22593.22334Pr-108
MUC16activatesR-22593.22334Pr-108
MYH2activatesR-22593.22334Pr-108
NRASactivatesR-22593.22334Pr-108
PRKD2activatesR-22593.22334Pr-108
RNASeq_FGFR3_CallactivatesR-22593.22334Pr-108
MYCactivatesR-22593.22334Pr-108
t(4;14)activatesR-22593.22334Pr-108
amp1qactivatesR-22593.22334Pr-108
del13activatesR-22593.22334Pr-108
t(4;14)_cytogeneticactivatesR-22593.22334Pr-108
CYLDactivatesR-22623.31057Pr-108
FAT1activatesR-22623.31057Pr-108
FGFR3activatesR-22623.31057Pr-108
MAXactivatesR-22623.31057Pr-108
MUC16activatesR-22623.31057Pr-108
NRASactivatesR-22623.31057Pr-108
PRKD2activatesR-22623.31057Pr-108
RNASeq_FGFR3_CallactivatesR-22623.31057Pr-108
t(4;14)activatesR-22623.31057Pr-108
ROBO1activatesR-22623.31057Pr-108
del13activatesR-22623.31057Pr-108
t(4;14)_cytogeneticactivatesR-22623.31057Pr-108
DIS3repressesR-2263-3.97492Pr-135
FAT1repressesR-2263-3.97492Pr-135
FGFR3repressesR-2263-3.97492Pr-135
MAXrepressesR-2263-3.97492Pr-135
PRKD2repressesR-2263-3.97492Pr-135
RNASeq_FGFR3_CallrepressesR-2263-3.97492Pr-135
t(4;14)repressesR-2263-3.97492Pr-135
amp1qrepressesR-2263-3.97492Pr-135
del13repressesR-2263-3.97492Pr-135
t(4;14)_cytogeneticrepressesR-2263-3.97492Pr-135
DIS3activatesR-22615.47173Pr-71
FGFR3activatesR-22615.47173Pr-71
MAXactivatesR-22615.47173Pr-71
PRKD2activatesR-22615.47173Pr-71
RNASeq_FGFR3_CallactivatesR-22615.47173Pr-71
t(4;14)activatesR-22615.47173Pr-71
amp1qactivatesR-22615.47173Pr-71
del13activatesR-22615.47173Pr-71
t(4;14)_cytogeneticactivatesR-22615.47173Pr-71

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.