Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

RUNX2 - RUNX family transcription factor 2

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
860 ENSG00000124813 RUNX2 Q13950

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: RUNX2

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
t(11;14)RUNX2activatesR-12811.41826Pr-134

Genes (104)

MCTP1, RUVBL1, AMIGO3, HSD11B2, RHOG, FLII, TRIML2, RCC2, RAB39A, SEPHS2, ZNF467, ACBD4, SGSH, SHMT2, TRAPPC6B, C16orf72, EWSR1, SELENOF, CSF1, COPB2, ZFP90, TCN2, TARSL2, LMLN, ZBTB3, ZNF829, LAMP1, POLR3C, SESTD1, DCC, PLEKHG7, DPYD, IDO2, ZNF548, NHLRC3, MSANTD1, ARID2, KIAA0408, ZFP92, PAX5, SRGAP3, GDAP2, PDLIM7, HIST1H4C, ZNF785, ZNF786, KLHDC1, ZNF181, MYO1C, ADH5, SIRPA, HIBCH, QRICH1, ASNA1, SPRED2, HLA-DRB5, NCOA6, IPO9, LRIG2, FOXJ3, INPP5F, SELENOT, SPOUT1, PCMTD2, ZNF805, ASPDH, AKT1S1, ZBTB10, CFI, VGLL3, SCAF8, LAT, REPIN1, FBXO16, HAUS3, PPME1, DDX3X, NPEPL1, PPP3R1, C19orf73, TIAF1, PLCXD2, PISD, ARFGAP3, EIF4EBP3, TICAM2, TTC4, PCDHGA12, KIAA1147, THTPA, ZNF559-ZNF177, VBP1, PITX1, HOXD1

Regulons (119)

R-396, R-2169, R-1655, R-642, R-2117, R-1267, R-2764, R-2601, R-1748, R-1705, R-2634, R-172, R-2508, R-1102, R-1707, R-1656, R-1642, R-109, R-1270, R-1933, R-207, R-454, R-1100, R-2607, R-1875, R-57, R-797, R-108, R-1730, R-1741, R-580, R-2659, R-2763, R-944, R-2160, R-100, R-2180, R-2616, R-1769, R-2996, R-1082, R-2500, R-82, R-1310, R-1008, R-1099, R-2435, R-1641, R-380, R-2224, R-2596, R-1643, R-1158, R-1646, R-205, R-899, R-1077, R-516, R-1765, R-2334, R-1066, R-163, R-1376, R-671, R-1281, R-2502, R-2810, R-1582, R-2082, R-3166, R-1004, R-2888, R-822, R-1737, R-1535, R-2748, R-2332, R-2674, R-2614, R-2682, R-1276, R-1639, R-517, R-1732, R-1011, R-1466, R-289, R-2827, R-675, R-549, R-198, R-2841, R-2825, R-2598, R-1307, R-2902, R-515, R-1676, R-103, R-2742, R-1758, R-2229, R-1652, R-1715, R-1058, R-1644, R-1018, R-1653, R-1416, R-2828, R-2670, R-1528, R-446, R-2687, R-520, R-1108, R-1970, R-2513, R-2272

t(14;16)_cytogeneticRUNX2activatesR-12811.41826Pr-134

Genes (104)

MCTP1, RUVBL1, AMIGO3, HSD11B2, RHOG, FLII, TRIML2, RCC2, RAB39A, SEPHS2, ZNF467, ACBD4, SGSH, SHMT2, TRAPPC6B, C16orf72, EWSR1, SELENOF, CSF1, COPB2, ZFP90, TCN2, TARSL2, LMLN, ZBTB3, ZNF829, LAMP1, POLR3C, SESTD1, DCC, PLEKHG7, DPYD, IDO2, ZNF548, NHLRC3, MSANTD1, ARID2, KIAA0408, ZFP92, PAX5, SRGAP3, GDAP2, PDLIM7, HIST1H4C, ZNF785, ZNF786, KLHDC1, ZNF181, MYO1C, ADH5, SIRPA, HIBCH, QRICH1, ASNA1, SPRED2, HLA-DRB5, NCOA6, IPO9, LRIG2, FOXJ3, INPP5F, SELENOT, SPOUT1, PCMTD2, ZNF805, ASPDH, AKT1S1, ZBTB10, CFI, VGLL3, SCAF8, LAT, REPIN1, FBXO16, HAUS3, PPME1, DDX3X, NPEPL1, PPP3R1, C19orf73, TIAF1, PLCXD2, PISD, ARFGAP3, EIF4EBP3, TICAM2, TTC4, PCDHGA12, KIAA1147, THTPA, ZNF559-ZNF177, VBP1, PITX1, HOXD1

Regulons (119)

R-396, R-2169, R-1655, R-642, R-2117, R-1267, R-2764, R-2601, R-1748, R-1705, R-2634, R-172, R-2508, R-1102, R-1707, R-1656, R-1642, R-109, R-1270, R-1933, R-207, R-454, R-1100, R-2607, R-1875, R-57, R-797, R-108, R-1730, R-1741, R-580, R-2659, R-2763, R-944, R-2160, R-100, R-2180, R-2616, R-1769, R-2996, R-1082, R-2500, R-82, R-1310, R-1008, R-1099, R-2435, R-1641, R-380, R-2224, R-2596, R-1643, R-1158, R-1646, R-205, R-899, R-1077, R-516, R-1765, R-2334, R-1066, R-163, R-1376, R-671, R-1281, R-2502, R-2810, R-1582, R-2082, R-3166, R-1004, R-2888, R-822, R-1737, R-1535, R-2748, R-2332, R-2674, R-2614, R-2682, R-1276, R-1639, R-517, R-1732, R-1011, R-1466, R-289, R-2827, R-675, R-549, R-198, R-2841, R-2825, R-2598, R-1307, R-2902, R-515, R-1676, R-103, R-2742, R-1758, R-2229, R-1652, R-1715, R-1058, R-1644, R-1018, R-1653, R-1416, R-2828, R-2670, R-1528, R-446, R-2687, R-520, R-1108, R-1970, R-2513, R-2272

BAI3RUNX2repressesR-1282-2.24394Pr-94
CYLDRUNX2repressesR-1282-2.24394Pr-94
FGFR3RUNX2repressesR-1282-2.24394Pr-94
KIAA1244RUNX2repressesR-1282-2.24394Pr-94
PRKD2RUNX2repressesR-1282-2.24394Pr-94
RNASeq_FGFR3_CallRUNX2repressesR-1282-2.24394Pr-94
t(4;14)RUNX2repressesR-1282-2.24394Pr-94
TP53RUNX2repressesR-1282-2.24394Pr-94
BAI3RUNX2activatesR-12832.3191Pr-123
COL6A5RUNX2activatesR-12832.3191Pr-123
CYLDRUNX2activatesR-12832.3191Pr-123
DIS3RUNX2activatesR-12832.3191Pr-123
DNAH10RUNX2activatesR-12832.3191Pr-123
DUSP2RUNX2activatesR-12832.3191Pr-123
EYSRUNX2activatesR-12832.3191Pr-123
FGFR3RUNX2activatesR-12832.3191Pr-123
FRAS1RUNX2activatesR-12832.3191Pr-123
IRF4RUNX2activatesR-12832.3191Pr-123
KIAA1244RUNX2activatesR-12832.3191Pr-123
LAMA1RUNX2activatesR-12832.3191Pr-123
LTBRUNX2activatesR-12832.3191Pr-123
MYO10RUNX2activatesR-12832.3191Pr-123
PRKD2RUNX2activatesR-12832.3191Pr-123
t(11;14)RUNX2activatesR-12832.3191Pr-123
RNASeq_CCND2_CallRUNX2activatesR-12832.3191Pr-123
RNASeq_FGFR3_CallRUNX2activatesR-12832.3191Pr-123
t(4;14)RUNX2activatesR-12832.3191Pr-123
RYR2RUNX2activatesR-12832.3191Pr-123
SVILRUNX2activatesR-12832.3191Pr-123
TP53RUNX2activatesR-12832.3191Pr-123
XIRP2RUNX2activatesR-12832.3191Pr-123
ZANRUNX2activatesR-12832.3191Pr-123
amp1qRUNX2activatesR-12832.3191Pr-123
t(11;14)_cytogeneticRUNX2activatesR-12832.3191Pr-123
t(14;16)_cytogeneticRUNX2activatesR-12832.3191Pr-123
t(4;14)_cytogeneticRUNX2activatesR-12832.3191Pr-123
COL6A5RUNX2activatesR-12842.62887Pr-108
DIS3RUNX2activatesR-12842.62887Pr-108
DNAH10RUNX2activatesR-12842.62887Pr-108
FGFR3RUNX2activatesR-12842.62887Pr-108
IRF4RUNX2activatesR-12842.62887Pr-108
KIAA1244RUNX2activatesR-12842.62887Pr-108
LTBRUNX2activatesR-12842.62887Pr-108
MYO10RUNX2activatesR-12842.62887Pr-108
PRKD2RUNX2activatesR-12842.62887Pr-108
t(11;14)RUNX2activatesR-12842.62887Pr-108
RNASeq_FGFR3_CallRUNX2activatesR-12842.62887Pr-108
t(4;14)RUNX2activatesR-12842.62887Pr-108
RYR2RUNX2activatesR-12842.62887Pr-108
t(11;14)_cytogeneticRUNX2activatesR-12842.62887Pr-108
t(14;16)_cytogeneticRUNX2activatesR-12842.62887Pr-108
t(4;14)_cytogeneticRUNX2activatesR-12842.62887Pr-108

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.