Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

GABPB1 - GA binding protein transcription factor subunit beta 1

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
2553 ENSG00000104064 GABPB1 F5H7I4

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: GABPB1

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
NEBGABPB1repressesR-1954-0.317917Pr-39
t(11;14)GABPB1repressesR-1954-0.317917Pr-39
del13GABPB1repressesR-1954-0.317917Pr-39
RNASeq_CCND2_CallGABPB1repressesR-1950-0.479384Pr-137
del13GABPB1repressesR-1950-0.479384Pr-137
AHNAK2GABPB1activatesR-19480.575567Pr-35
PTPRDGABPB1activatesR-19480.575567Pr-35
t(11;14)GABPB1activatesR-19480.575567Pr-35
AHNAK2GABPB1activatesR-1953-0.958675Pr-9
FAT3GABPB1activatesR-1953-0.958675Pr-9
MAGI1GABPB1activatesR-1953-0.958675Pr-9
MYO10GABPB1activatesR-1953-0.958675Pr-9
NEBGABPB1activatesR-1953-0.958675Pr-9
PTPRDGABPB1activatesR-1953-0.958675Pr-9
t(11;14)GABPB1activatesR-1953-0.958675Pr-9
TACC2GABPB1activatesR-1953-0.958675Pr-9
ASXL3GABPB1activatesR-19490.960779Pr-13
SYNE1GABPB1activatesR-19490.960779Pr-13
TACC2GABPB1activatesR-19490.960779Pr-13
del13GABPB1activatesR-19490.960779Pr-13
AHNAK2GABPB1repressesR-19551.09101Pr-72
PTPRDGABPB1repressesR-19551.09101Pr-72
t(11;14)GABPB1repressesR-19551.09101Pr-72
RNASeq_CCND2_CallGABPB1repressesR-19551.09101Pr-72
ASXL3GABPB1repressesR-1956-1.51438Pr-135
NEBGABPB1repressesR-1956-1.51438Pr-135
PTPRDGABPB1repressesR-1956-1.51438Pr-135
t(11;14)GABPB1repressesR-1956-1.51438Pr-135
SYNE1GABPB1repressesR-1956-1.51438Pr-135
TACC2GABPB1repressesR-1956-1.51438Pr-135
del13GABPB1repressesR-1956-1.51438Pr-135
AHNAK2GABPB1repressesR-19461.88107Pr-109
FAT3GABPB1repressesR-19461.88107Pr-109
AHNAK2GABPB1activatesR-1957-2.2937Pr-118
PTPRDGABPB1activatesR-1957-2.2937Pr-118
RNASeq_CCND2_CallGABPB1activatesR-1957-2.2937Pr-118
AHNAK2GABPB1repressesR-19442.5919Pr-55
FAT3GABPB1repressesR-19442.5919Pr-55
MYO10GABPB1repressesR-19442.5919Pr-55
PTPRDGABPB1repressesR-19442.5919Pr-55
t(11;14)GABPB1repressesR-19442.5919Pr-55
AHNAK2GABPB1activatesR-1945-3.71816Pr-35
FAT3GABPB1activatesR-1945-3.71816Pr-35
RNASeq_MAFA_CallGABPB1activatesR-1945-3.71816Pr-35
TACC2GABPB1activatesR-1945-3.71816Pr-35
AHNAK2GABPB1repressesR-19513.93668Pr-50
FAT3GABPB1repressesR-19513.93668Pr-50
PTPRDGABPB1repressesR-19513.93668Pr-50

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.