Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

TRAF4 - TNF receptor associated factor 4

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
9618 ENSG00000076604 TRAF4 C9JJ10

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: TRAF4

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
AHNAK2TRAF4activatesR-3037-0.0698997Pr-2
CMYA5TRAF4activatesR-3037-0.0698997Pr-2
FAT3TRAF4activatesR-3037-0.0698997Pr-2
MACF1TRAF4activatesR-3037-0.0698997Pr-2
NEBTRAF4activatesR-3037-0.0698997Pr-2
PCDH10TRAF4activatesR-3037-0.0698997Pr-2
PTPRDTRAF4activatesR-3037-0.0698997Pr-2
t(11;14)TRAF4activatesR-3037-0.0698997Pr-2
RNASeq_MAFB_CallTRAF4activatesR-3037-0.0698997Pr-2
TACC2TRAF4activatesR-3037-0.0698997Pr-2
t(11;14)TRAF4activatesR-3038-0.143949Pr-34
CYLDTRAF4repressesR-3042-0.342468Pr-122
NRASTRAF4repressesR-3042-0.342468Pr-122
t(11;14)TRAF4repressesR-3042-0.342468Pr-122
RNASeq_FGFR3_CallTRAF4repressesR-3042-0.342468Pr-122
t(4;14)TRAF4repressesR-3042-0.342468Pr-122
TRAF3TRAF4repressesR-3042-0.342468Pr-122
t(4;14)_cytogeneticTRAF4repressesR-3042-0.342468Pr-122
AHNAK2TRAF4activatesR-3043-0.355413Pr-4
DIS3TRAF4activatesR-3043-0.355413Pr-4
FAT3TRAF4activatesR-3043-0.355413Pr-4
MACF1TRAF4activatesR-3043-0.355413Pr-4
MAGI1TRAF4activatesR-3043-0.355413Pr-4
MAXTRAF4activatesR-3043-0.355413Pr-4
MYO10TRAF4activatesR-3043-0.355413Pr-4
RNASeq_MAFA_CallTRAF4activatesR-3043-0.355413Pr-4
AHNAK2TRAF4activatesR-3033-0.781484Pr-0
DCHS1TRAF4activatesR-3033-0.781484Pr-0
FAT3TRAF4activatesR-3033-0.781484Pr-0
MACF1TRAF4activatesR-3033-0.781484Pr-0
MAGI1TRAF4activatesR-3033-0.781484Pr-0
MYO10TRAF4activatesR-3033-0.781484Pr-0
NEBTRAF4activatesR-3033-0.781484Pr-0
PCDH10TRAF4activatesR-3033-0.781484Pr-0
PTPRDTRAF4activatesR-3033-0.781484Pr-0
t(11;14)TRAF4activatesR-3033-0.781484Pr-0
RNASeq_MAFA_CallTRAF4activatesR-3033-0.781484Pr-0
TACC2TRAF4activatesR-3033-0.781484Pr-0
AHNAK2TRAF4activatesR-30341.06768Pr-124
KRASTRAF4activatesR-30341.06768Pr-124
MAXTRAF4activatesR-30341.06768Pr-124
MYO10TRAF4activatesR-30341.06768Pr-124
NRASTRAF4activatesR-30341.06768Pr-124
PCDH10TRAF4activatesR-30341.06768Pr-124
t(11;14)TRAF4activatesR-30341.06768Pr-124
RNASeq_CCND2_CallTRAF4activatesR-30341.06768Pr-124
TRAF3TRAF4activatesR-30341.06768Pr-124
CYLDTRAF4repressesR-3036-1.23044Pr-112
t(11;14)TRAF4repressesR-3036-1.23044Pr-112
RNASeq_FGFR3_CallTRAF4repressesR-3036-1.23044Pr-112
RNASeq_MAFA_CallTRAF4repressesR-3036-1.23044Pr-112
t(4;14)TRAF4repressesR-3036-1.23044Pr-112
t(4;14)_cytogeneticTRAF4repressesR-3036-1.23044Pr-112
DCHS1TRAF4repressesR-30391.27922Pr-127
DIS3TRAF4repressesR-30391.27922Pr-127
RNASeq_FGFR3_CallTRAF4repressesR-30391.27922Pr-127
t(4;14)TRAF4repressesR-30391.27922Pr-127
ZFHX3TRAF4repressesR-30391.27922Pr-127
del17TRAF4repressesR-30391.27922Pr-127
AHNAK2TRAF4activatesR-3035-2.1684Pr-17
CMYA5TRAF4activatesR-3035-2.1684Pr-17
CYLDTRAF4activatesR-3035-2.1684Pr-17
FAT3TRAF4activatesR-3035-2.1684Pr-17
PCDH10TRAF4activatesR-3035-2.1684Pr-17
RNASeq_CCND2_CallTRAF4activatesR-3035-2.1684Pr-17
TACC2TRAF4activatesR-3035-2.1684Pr-17
AHNAK2TRAF4activatesR-3044-2.17055Pr-86
FAT3TRAF4activatesR-3044-2.17055Pr-86
PCDH10TRAF4activatesR-3044-2.17055Pr-86
CYLDTRAF4activatesR-3040-2.51251Pr-69

Genes (1)

KLF13

Regulons (9)

R-3040, R-3188, R-1581, R-88, R-1665, R-334, R-703, R-783, R-2719

RNASeq_FGFR3_CallTRAF4activatesR-3040-2.51251Pr-69

Genes (1)

KLF13

Regulons (9)

R-3040, R-3188, R-1581, R-88, R-1665, R-334, R-703, R-783, R-2719

AHNAK2TRAF4repressesR-30413.08861Pr-50
DCHS1TRAF4repressesR-30413.08861Pr-50
DIS3TRAF4repressesR-30413.08861Pr-50
FAT3TRAF4repressesR-30413.08861Pr-50
PTPRDTRAF4repressesR-30413.08861Pr-50
RNASeq_FGFR3_CallTRAF4repressesR-30413.08861Pr-50
RNASeq_MAFA_CallTRAF4repressesR-30413.08861Pr-50
RNASeq_MAFB_CallTRAF4repressesR-30413.08861Pr-50
t(4;14)TRAF4repressesR-30413.08861Pr-50
SVILTRAF4repressesR-30413.08861Pr-50
TRAF3TRAF4repressesR-30413.08861Pr-50
UBR4TRAF4repressesR-30413.08861Pr-50
t(14;16)_cytogeneticTRAF4repressesR-30413.08861Pr-50
t(4;14)_cytogeneticTRAF4repressesR-30413.08861Pr-50

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.