Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

-

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: ELK3

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
CMYA5ELK3repressesR-2846-0.0445985Pr-39
t(11;14)ELK3repressesR-2846-0.0445985Pr-39
RNASeq_FGFR3_CallELK3repressesR-2846-0.0445985Pr-39
t(4;14)ELK3repressesR-2846-0.0445985Pr-39
amp1qELK3repressesR-2846-0.0445985Pr-39
del13ELK3repressesR-2846-0.0445985Pr-39
t(11;14)_cytogeneticELK3repressesR-2846-0.0445985Pr-39
t(4;14)_cytogeneticELK3repressesR-2846-0.0445985Pr-39
ABCA13ELK3repressesR-28451.08229Pr-136
AHNAK2ELK3repressesR-28451.08229Pr-136
CMYA5ELK3repressesR-28451.08229Pr-136
DNAH5ELK3repressesR-28451.08229Pr-136
MACF1ELK3repressesR-28451.08229Pr-136
t(11;14)ELK3repressesR-28451.08229Pr-136
amp1qELK3activatesR-28481.27816Pr-13
del13ELK3activatesR-28481.27816Pr-13
AHNAK2ELK3repressesR-28472.18224Pr-135
CMYA5ELK3repressesR-28472.18224Pr-135
MACF1ELK3repressesR-28472.18224Pr-135

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.