Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

ATF5 - activating transcription factor 5

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
22809 ENSG00000169136 ATF5 M0QZD2

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: ATF5

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
FAM46CATF5activatesR-2404-1.7554Pr-136
NRASATF5activatesR-2404-1.7554Pr-136
RELNATF5activatesR-2404-1.7554Pr-136
t(11;14)ATF5activatesR-2404-1.7554Pr-136
RNASeq_FGFR3_CallATF5activatesR-2404-1.7554Pr-136
t(4;14)ATF5activatesR-2404-1.7554Pr-136
t(11;14)_cytogeneticATF5activatesR-2404-1.7554Pr-136
FAM46CATF5activatesR-2405-2.17053Pr-109
FGFR3ATF5activatesR-2405-2.17053Pr-109
t(11;14)ATF5activatesR-2405-2.17053Pr-109
RNASeq_FGFR3_CallATF5activatesR-2405-2.17053Pr-109
t(4;14)ATF5activatesR-2405-2.17053Pr-109
SETD2ATF5activatesR-2405-2.17053Pr-109
TTNATF5activatesR-2405-2.17053Pr-109

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.