Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

NF1 - neurofibromin 1

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
4763 ENSG00000196712 NF1 A0A8Q3WL49

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: NF1

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
CMYA5NF1activatesR-127-0.22305Pr-18
DNAH5NF1activatesR-127-0.22305Pr-18
IRF4NF1activatesR-127-0.22305Pr-18
t(11;14)NF1activatesR-127-0.22305Pr-18
MYCNF1activatesR-127-0.22305Pr-18
TP53NF1activatesR-127-0.22305Pr-18
del17NF1activatesR-127-0.22305Pr-18
t(11;14)_cytogeneticNF1activatesR-127-0.22305Pr-18
ANK2NF1activatesR-1300.381224Pr-109
CMYA5NF1activatesR-1300.381224Pr-109
DIS3NF1activatesR-1300.381224Pr-109
FAM46CNF1activatesR-1300.381224Pr-109
FLGNF1activatesR-1300.381224Pr-109
IRF4NF1activatesR-1300.381224Pr-109
KIAA1109NF1activatesR-1300.381224Pr-109
LRP2NF1activatesR-1300.381224Pr-109
MACF1NF1activatesR-1300.381224Pr-109
RELNNF1activatesR-1300.381224Pr-109
t(11;14)NF1activatesR-1300.381224Pr-109
MYCNF1activatesR-1300.381224Pr-109
t(11;14)_cytogeneticNF1activatesR-1300.381224Pr-109
COL12A1NF1repressesR-129-0.687271Pr-55
OBSCNNF1repressesR-129-0.687271Pr-55
t(11;14)NF1repressesR-129-0.687271Pr-55
ROBO1NF1repressesR-129-0.687271Pr-55
t(11;14)_cytogeneticNF1repressesR-129-0.687271Pr-55
KIAA1109NF1activatesR-126-0.881056Pr-62
t(11;14)NF1activatesR-126-0.881056Pr-62
RNASeq_CCND3_CallNF1activatesR-126-0.881056Pr-62
t(11;14)_cytogeneticNF1activatesR-126-0.881056Pr-62
FAM46CNF1activatesR-1280.964935Pr-126
IRF4NF1activatesR-1280.964935Pr-126
LRP2NF1activatesR-1280.964935Pr-126
PCLONF1activatesR-1280.964935Pr-126
t(11;14)NF1activatesR-1280.964935Pr-126
SP140NF1activatesR-1280.964935Pr-126
t(11;14)_cytogeneticNF1activatesR-1280.964935Pr-126
t(14;16)_cytogeneticNF1activatesR-1280.964935Pr-126
DIS3NF1repressesR-125-1.32934Pr-118
FAM46CNF1repressesR-125-1.32934Pr-118
t(11;14)NF1repressesR-125-1.32934Pr-118
MYCNF1repressesR-125-1.32934Pr-118
ROBO1NF1repressesR-125-1.32934Pr-118
t(11;14)_cytogeneticNF1repressesR-125-1.32934Pr-118
CMYA5NF1repressesR-131-2.28098Pr-118
DIS3NF1repressesR-131-2.28098Pr-118
MYCNF1repressesR-131-2.28098Pr-118
ROBO1NF1repressesR-131-2.28098Pr-118
DIS3NF1repressesR-124-3.496Pr-36
FAM46CNF1repressesR-124-3.496Pr-36
IRF4NF1repressesR-124-3.496Pr-36
t(11;14)NF1repressesR-124-3.496Pr-36
RNASeq_CCND3_CallNF1repressesR-124-3.496Pr-36
MYCNF1repressesR-124-3.496Pr-36
ROBO1NF1repressesR-124-3.496Pr-36
t(11;14)_cytogeneticNF1repressesR-124-3.496Pr-36

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.