Mutation

List of causal flows influenced by the mutation.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulon that contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Mutation del13

RegulatorRoleRegulonCox Hazard Ratio (Regulon)Transcriptional Programs
DR1up-regulatesR-45-0.00173773Pr-95

Genes (5)

EIF3F, ASB8, NDUFV2, METTL23, GM2A

Regulons (5)

R-45, R-984, R-5, R-1928, R-600

TP53down-regulatesR-3620.0022486Pr-5
ZFXup-regulatesR-19240.00674942Pr-5
PRDM1up-regulatesR-20870.00684992Pr-117
FOXP1up-regulatesR-3140-0.0143587Pr-59
PAX6down-regulatesR-15560.0296134Pr-117
FOXO1up-regulatesR-1401-0.0327727Pr-29
ELK3up-regulatesR-2846-0.0445985Pr-39
ZNF740down-regulatesR-388-0.0546517Pr-118
USF1up-regulatesR-1855-0.0570761Pr-2
RORAup-regulatesR-2267-0.0655424Pr-2
SMAD3up-regulatesR-2966-0.0660624Pr-85
ELF3up-regulatesR-21360.0676162Pr-1
FOXJ2up-regulatesR-14290.070253Pr-14
STAT3up-regulatesR-311-0.0731142Pr-135
ELF3up-regulatesR-21480.0747421Pr-3
DDIT3up-regulatesR-486-0.0796563Pr-2
ZBTB3down-regulatesR-1265-0.0860533Pr-136
CREB1up-regulatesR-2710.0973451Pr-1
FOXJ2up-regulatesR-14360.0974287Pr-41
SREBF1up-regulatesR-11390.101608Pr-7
MEF2Dup-regulatesR-8780.101734Pr-2
PRDM1up-regulatesR-20760.102195Pr-0
TP53down-regulatesR-3630.103829Pr-2
PRDM1up-regulatesR-2081-0.107496Pr-23
STAT3up-regulatesR-308-0.111167Pr-7
ZNF740down-regulatesR-3860.111482Pr-58
TP53down-regulatesR-3760.127114Pr-38
KLF7up-regulatesR-2790.127646Pr-1
FOXJ3up-regulatesR-28790.135462Pr-4
TCF7L1up-regulatesR-3174-0.135953Pr-99
ETV5up-regulatesR-3420.139146Pr-117
MEF2Aup-regulatesR-18840.142343Pr-23
CREB5up-regulatesR-7760.145302Pr-12
HSF2up-regulatesR-3164-0.151939Pr-0
FOXK1up-regulatesR-11950.153559Pr-7
VBP1down-regulatesR-2104-0.154186Pr-2
HBP1up-regulatesR-1826-0.154819Pr-1
ZSCAN16down-regulatesR-631-0.165596Pr-2
ARID5Aup-regulatesR-610-0.170127Pr-135
FOXO1up-regulatesR-13950.17036Pr-1
ZEB1up-regulatesR-22520.171985Pr-117
NR3C1up-regulatesR-3178-0.173046Pr-2
ATF4up-regulatesR-920.179335Pr-5
NR3C1up-regulatesR-3177-0.1813Pr-6
ENSG00000105991down-regulatesR-228-0.185488Pr-3
SPIBup-regulatesR-6620.193889Pr-1
ZNF410up-regulatesR-1940-0.201053Pr-133
MEF2Dup-regulatesR-869-0.203027Pr-6
THRAup-regulatesR-620.204827Pr-117
MEF2Aup-regulatesR-18700.206143Pr-29
ZNF740down-regulatesR-383-0.216662Pr-16
ETV5up-regulatesR-338-0.237093Pr-0
GMEB2up-regulatesR-2156-0.237482Pr-0
FOXK1up-regulatesR-1207-0.237776Pr-5
FOXP1up-regulatesR-31370.242409Pr-5
IRF7down-regulatesR-1086-0.243887Pr-41
NFE2L2down-regulatesR-1911-0.246239Pr-2
YY1up-regulatesR-25270.251774Pr-5
ELF2up-regulatesR-966-0.257437Pr-37
CEBPGup-regulatesR-436-0.258645Pr-2
ZBTB3down-regulatesR-1266-0.259836Pr-117
POU2F1up-regulatesR-77-0.259838Pr-14
TP53down-regulatesR-372-0.261151Pr-133
FOXO1up-regulatesR-14150.265962Pr-33
ZEB1up-regulatesR-22470.272353Pr-7
ELF2up-regulatesR-9840.272388Pr-95

Genes (5)

EIF3F, ASB8, NDUFV2, METTL23, GM2A

Regulons (5)

R-45, R-984, R-5, R-1928, R-600

POU2F1up-regulatesR-78-0.272418Pr-2
FOXJ3up-regulatesR-28820.27442Pr-117
HBP1up-regulatesR-18320.278908Pr-14
TP53down-regulatesR-374-0.289282Pr-104
FOXJ3up-regulatesR-2876-0.290335Pr-3
NR1H3down-regulatesR-640.29826Pr-6
ARID5Aup-regulatesR-597-0.298346Pr-85
POU2F1up-regulatesR-83-0.310208Pr-41
GABPB1up-regulatesR-1954-0.317917Pr-39
TFE3up-regulatesR-558-0.31956Pr-39
FOXK1up-regulatesR-1191-0.320198Pr-3
FOXJ3up-regulatesR-28720.323358Pr-1
ZNF281up-regulatesR-24900.3247Pr-3
KLF4up-regulatesR-27540.332396Pr-7
ZNF281up-regulatesR-2479-0.333368Pr-2
RORAup-regulatesR-22640.341196Pr-1
HSF1up-regulatesR-49-0.350252Pr-2
FOXK1up-regulatesR-1192-0.353736Pr-0
PBX1up-regulatesR-21150.357421Pr-71
IRF4down-regulatesR-4910.365902Pr-88
CREB1up-regulatesR-2720.366974Pr-2
ZFXup-regulatesR-1927-0.36742Pr-5
HBP1up-regulatesR-18390.37241Pr-23
PAX6down-regulatesR-1545-0.374773Pr-14
ZNF740down-regulatesR-390-0.374881Pr-2
TFE3up-regulatesR-556-0.378688Pr-0
TP53down-regulatesR-369-0.383401Pr-117
CEBPGup-regulatesR-4510.388628Pr-117
SPIBup-regulatesR-6610.39364Pr-85
MEF2Aup-regulatesR-1869-0.397022Pr-2
HBP1up-regulatesR-1831-0.397545Pr-2
ARID5Aup-regulatesR-596-0.400576Pr-1
ETV6up-regulatesR-7000.401784Pr-24
SOX4up-regulatesR-2182-0.40215Pr-23
ZBTB3down-regulatesR-12740.404038Pr-23
FOXP1up-regulatesR-3121-0.417258Pr-3
ZBTB3down-regulatesR-1275-0.421961Pr-3
NFE2L2down-regulatesR-19080.425689Pr-4
FOXK1up-regulatesR-11900.433468Pr-1
ZFXup-regulatesR-1917-0.446489Pr-6
CREB5up-regulatesR-7750.446924Pr-2
HINFPdown-regulatesR-2624-0.44835Pr-35
ELF2up-regulatesR-9690.451308Pr-13
NFATC2up-regulatesR-1695-0.454371Pr-4
MAFGup-regulatesR-14870.456604Pr-34
FOXK1up-regulatesR-1212-0.459405Pr-99
FOXP1up-regulatesR-3120-0.467693Pr-6
GABPB1up-regulatesR-1950-0.479384Pr-137
ZFXup-regulatesR-19280.481402Pr-95

Genes (5)

EIF3F, ASB8, NDUFV2, METTL23, GM2A

Regulons (5)

R-45, R-984, R-5, R-1928, R-600

ELK1up-regulatesR-6360.485452Pr-0
PBX1up-regulatesR-21080.496117Pr-57

Genes (3)

UCP2, ZNF746, IARS

Regulons (3)

R-1059, R-2108, R-2499

CEBPGup-regulatesR-435-0.497945Pr-6
FOXO1up-regulatesR-14060.499782Pr-18
ZFXup-regulatesR-19230.509611Pr-7
PRDM1up-regulatesR-20800.517642Pr-59
MEF2Aup-regulatesR-1866-0.518528Pr-3
AHRup-regulatesR-7960.519167Pr-2
EWSR1up-regulatesR-2541-0.524632Pr-0
ZFXup-regulatesR-19260.529957Pr-51

Genes (3)

GPR3

Regulons (8)

R-1926, R-1648, R-3005, R-696, R-2308, R-1210, R-888, R-1531

IRF7down-regulatesR-1093-0.530543Pr-46

Genes (3)

RELL1, NCKIPSD, ACAD11

Regulons (3)

R-1093, R-364, R-2171

CEBPGup-regulatesR-440-0.532761Pr-0
FOXJ3up-regulatesR-28930.536867Pr-33
ELF3up-regulatesR-21470.536867Pr-33
PAX6down-regulatesR-1554-0.5394Pr-4
ETV6up-regulatesR-697-0.542759Pr-6
ELF2up-regulatesR-9710.550013Pr-41
MAFGup-regulatesR-14950.551417Pr-117
NFATC2up-regulatesR-16880.551677Pr-85
BACH1up-regulatesR-4770.551978Pr-23
FOXP1up-regulatesR-3126-0.555658Pr-2
NR3C1up-regulatesR-3181-0.557618Pr-12
POU2F1up-regulatesR-690.559914Pr-1
ZNF281up-regulatesR-24740.571768Pr-1
TP53down-regulatesR-3700.58214Pr-7
SMAD3up-regulatesR-2958-0.582936Pr-6
POU2F1up-regulatesR-800.583193Pr-29
FOXP1up-regulatesR-31350.58463Pr-31

Genes (4)

TTC3, ARL4C, GTF2F2, IFRD2

Regulons (4)

R-3135, R-394, R-1836, R-2757

POU2F1up-regulatesR-71-0.58757Pr-3
FOXJ3up-regulatesR-2881-0.590232Pr-34
PAX6down-regulatesR-15430.590247Pr-1
NR3C1up-regulatesR-31900.592808Pr-23
HSF1up-regulatesR-50-0.599033Pr-16
NR3C1up-regulatesR-3175-0.602124Pr-0
HSF1up-regulatesR-540.604731Pr-125
FOXJ2up-regulatesR-14190.60607Pr-1
MAFGup-regulatesR-14970.606698Pr-3
PRDM1up-regulatesR-20750.612528Pr-14
ELK4up-regulatesR-7670.613021Pr-0
ELF2up-regulatesR-973-0.61578Pr-135
MEF2Aup-regulatesR-1865-0.617403Pr-6
CEBPGup-regulatesR-4340.620526Pr-1
ELK4up-regulatesR-7710.623476Pr-117
PRDM1up-regulatesR-2088-0.627838Pr-15
CENPXdown-regulatesR-2783-0.628905Pr-6
PAX6down-regulatesR-1542-0.629177Pr-0
ETV3up-regulatesR-2529-0.631438Pr-58
CEBPGup-regulatesR-4490.634521Pr-8
TP53down-regulatesR-377-0.637451Pr-3
ZNF281up-regulatesR-2485-0.64174Pr-4
THRAup-regulatesR-59-0.644538Pr-30
HIC2up-regulatesR-23710.647812Pr-117
ETV3up-regulatesR-25350.649252Pr-117
FOXJ3up-regulatesR-2878-0.651802Pr-14
EWSR1up-regulatesR-25590.652492Pr-125
ELF3up-regulatesR-2141-0.655011Pr-39
ZNF281up-regulatesR-2472-0.661858Pr-0
MYBup-regulatesR-6150.668149Pr-85
FOXO1up-regulatesR-1396-0.668881Pr-6
USF1up-regulatesR-18600.671433Pr-21
IKZF1up-regulatesR-9930.673265Pr-29
FOXJ3up-regulatesR-28890.679009Pr-23
MEF2Dup-regulatesR-8770.682478Pr-55
MEF2Aup-regulatesR-18830.684037Pr-18
USF1up-regulatesR-1857-0.686447Pr-39
NFATC1up-regulatesR-2201-0.687031Pr-120
CREB5up-regulatesR-777-0.690647Pr-4
TP53down-regulatesR-359-0.690836Pr-1
SOX4up-regulatesR-21810.696227Pr-7
KLF7up-regulatesR-287-0.699278Pr-28
HBP1up-regulatesR-1846-0.703016Pr-117
HINFPdown-regulatesR-26260.710238Pr-108
PEBP1up-regulatesR-1757-0.714169Pr-41
FOXJ2up-regulatesR-1420-0.718874Pr-6
ELF3up-regulatesR-21450.727153Pr-7
FLI1down-regulatesR-786-0.733394Pr-59
CREB1up-regulatesR-269-0.734328Pr-0
TCF4up-regulatesR-29990.734651Pr-131
YY1up-regulatesR-2528-0.740848Pr-6
PRDM4up-regulatesR-30740.742876Pr-1
SPIBup-regulatesR-663-0.744294Pr-3
BACH2up-regulatesR-28430.746861Pr-7
CREB5up-regulatesR-772-0.748892Pr-0
ETV5up-regulatesR-341-0.752701Pr-135
FOXO1up-regulatesR-14100.757234Pr-7
ELF3up-regulatesR-2154-0.760352Pr-12
CREB1up-regulatesR-276-0.764227Pr-10
FOXJ2up-regulatesR-14310.765091Pr-16
ELF2up-regulatesR-967-0.76768Pr-118
ELK1up-regulatesR-647-0.775241Pr-0
SOX4up-regulatesR-2189-0.776926Pr-12
MYBup-regulatesR-619-0.781425Pr-59
TFE3up-regulatesR-557-0.782674Pr-6
POU2F2up-regulatesR-2510-0.785808Pr-58
VBP1down-regulatesR-21000.788348Pr-0
CEBPGup-regulatesR-443-0.789852Pr-4
POU2F1up-regulatesR-890.796686Pr-18
FOXO1up-regulatesR-1394-0.807027Pr-0
FLI1down-regulatesR-7920.810335Pr-120
CEBPGup-regulatesR-450-0.810406Pr-59
ELF2up-regulatesR-986-0.813119Pr-117
RARBdown-regulatesR-11030.818811Pr-1
STAT5Bup-regulatesR-23660.819111Pr-85
NR1H3down-regulatesR-63-0.820568Pr-0
ELF2up-regulatesR-9820.82189Pr-21
ZFXup-regulatesR-1916-0.823941Pr-0
FOXK1up-regulatesR-1188-0.824193Pr-0