Mutation

List of causal flows influenced by the mutation.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulon that contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Mutation FAT1

RegulatorRoleRegulonCox Hazard Ratio (Regulon)Transcriptional Programs
ENSG00000165066down-regulatesR-3076-1.21549Pr-58
POU2F2up-regulatesR-25121.37817Pr-62
MAFup-regulatesR-1041.49044Pr-88
ENSG00000087510up-regulatesR-2631-1.77831Pr-130
MZF1down-regulatesR-3022-2.32297Pr-139
ENSG00000128652up-regulatesR-22593.22334Pr-108
HOXD1up-regulatesR-13013.24332Pr-108
TEFdown-regulatesR-2406-3.30554Pr-135
ENSG00000128652up-regulatesR-22623.31057Pr-108
ENSG00000165066down-regulatesR-30773.31834Pr-52
DLX4up-regulatesR-19863.40059Pr-52
BACH2up-regulatesR-2844-3.59383Pr-99
ENSG00000136574up-regulatesR-343.74664Pr-108
ENSG00000128652up-regulatesR-2263-3.97492Pr-135
SOX4up-regulatesR-21784.19485Pr-108
MAFup-regulatesR-1065.50825Pr-76

Genes (1)

Regulons (7)

R-1140, R-9, R-1791, R-355, R-1231, R-106, R-3024

Mutation Causal Mechanistic Flow Network

Cytoscape network of the causal flows influenced by the mutation.

Influences from mutations (magenta chevrons) to regulators (blue triangles) and then from regulators to the given regulon (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.

Mutation Survival Plots

Kaplan-Meier curves demonstrating the sub-stratification of clinical subtypes based upon the network activity of the most predictive individual or pair of genes as determined by the LASSO predictions