Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

USF1 - upstream transcription factor 1

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
7391 ENSG00000158773 USF1 E9PQA2

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: USF1

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
del13USF1activatesR-1855-0.0570761Pr-2
t(11;14)_cytogeneticUSF1activatesR-1855-0.0570761Pr-2
t(4;14)USF1activatesR-18600.671433Pr-21
del13USF1activatesR-18600.671433Pr-21
t(11;14)_cytogeneticUSF1activatesR-18600.671433Pr-21
MYCUSF1repressesR-1857-0.686447Pr-39
t(4;14)USF1repressesR-1857-0.686447Pr-39
del13USF1repressesR-1857-0.686447Pr-39
t(4;14)USF1activatesR-18540.856068Pr-5
del13USF1activatesR-18540.856068Pr-5
t(11;14)_cytogeneticUSF1activatesR-18540.856068Pr-5
del13USF1activatesR-1853-0.88226Pr-0
NRASUSF1repressesR-1859-1.69216Pr-118
RNASeq_CCND3_CallUSF1repressesR-1859-1.69216Pr-118
MYCUSF1repressesR-1859-1.69216Pr-118
t(4;14)USF1repressesR-1859-1.69216Pr-118
del13USF1repressesR-1859-1.69216Pr-118
t(4;14)USF1activatesR-18581.97343Pr-13
del13USF1activatesR-18581.97343Pr-13
NRASUSF1repressesR-18622.03502Pr-79

Genes (3)

CD2AP, NFAM1, UBE2V1

Regulons (3)

R-2216, R-1862, R-2507

RNASeq_CCND3_CallUSF1repressesR-18622.03502Pr-79

Genes (3)

CD2AP, NFAM1, UBE2V1

Regulons (3)

R-2216, R-1862, R-2507

MYCUSF1repressesR-18622.03502Pr-79

Genes (3)

CD2AP, NFAM1, UBE2V1

Regulons (3)

R-2216, R-1862, R-2507

t(4;14)USF1repressesR-18622.03502Pr-79

Genes (3)

CD2AP, NFAM1, UBE2V1

Regulons (3)

R-2216, R-1862, R-2507

TRAF3USF1repressesR-18622.03502Pr-79

Genes (3)

CD2AP, NFAM1, UBE2V1

Regulons (3)

R-2216, R-1862, R-2507

t(11;14)_cytogeneticUSF1repressesR-18622.03502Pr-79

Genes (3)

CD2AP, NFAM1, UBE2V1

Regulons (3)

R-2216, R-1862, R-2507

KIAA1244USF1activatesR-1861-2.67128Pr-12
NRASUSF1activatesR-1861-2.67128Pr-12
t(4;14)USF1activatesR-1861-2.67128Pr-12
del13USF1activatesR-1861-2.67128Pr-12
MXRA5USF1activatesR-1856-3.72712Pr-64
NFKB2USF1activatesR-1856-3.72712Pr-64
NRASUSF1activatesR-1856-3.72712Pr-64
RNASeq_CCND3_CallUSF1activatesR-1856-3.72712Pr-64
MYCUSF1activatesR-1856-3.72712Pr-64
SVEP1USF1activatesR-1856-3.72712Pr-64
t(11;14)_cytogeneticUSF1activatesR-1856-3.72712Pr-64

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.