Regulator

Summary of regulator annotations and link-out to annotation databases

Basic gene annotations are collected from Uniprot and displayed with links to original sources. A quick link to explore the genomic context with Uniprot Browser is available.

RORA - RAR related orphan receptor A

Uniprot Browser
Entrez IDEnsEMBL IDPreferred NameUniprot ID
6095 ENSG00000069667 RORA P35398

List of causal flows containing the regulator.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulonthat contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Regulator: RORA

MutationRegulatorRoleRegulonCox Hazard RatioTranscriptional Program
t(11;14)RORArepressesR-2269-0.010155Pr-137
AHNAK2RORAactivatesR-2267-0.0655424Pr-2
BRAFRORAactivatesR-2267-0.0655424Pr-2
del13RORAactivatesR-2267-0.0655424Pr-2
ASXL3RORAactivatesR-22640.341196Pr-1
MAGI1RORAactivatesR-22640.341196Pr-1
amp1qRORAactivatesR-22640.341196Pr-1
del13RORAactivatesR-22640.341196Pr-1
del1pRORAactivatesR-22640.341196Pr-1
t(11;14)RORArepressesR-22740.508233Pr-129
ASXL3RORArepressesR-22800.914602Pr-62
t(11;14)RORArepressesR-22800.914602Pr-62
amp1qRORArepressesR-22800.914602Pr-62
del13RORArepressesR-22800.914602Pr-62
AHNAK2RORAactivatesR-2279-1.26921Pr-27
KDM3BRORAactivatesR-2279-1.26921Pr-27
LTBRORAactivatesR-2279-1.26921Pr-27
del13RORAactivatesR-2279-1.26921Pr-27
AHNAK2RORAactivatesR-22651.67679Pr-5
ASXL3RORAactivatesR-22651.67679Pr-5
BRAFRORAactivatesR-22651.67679Pr-5
amp1qRORAactivatesR-22651.67679Pr-5
del13RORAactivatesR-22651.67679Pr-5
PTPRTRORAactivatesR-2275-1.88761Pr-112
t(11;14)RORAactivatesR-2275-1.88761Pr-112
amp1qRORAactivatesR-2275-1.88761Pr-112
del13RORAactivatesR-2275-1.88761Pr-112
AHNAK2RORArepressesR-22662.05916Pr-136
MAGI1RORArepressesR-22662.05916Pr-136
KDM3BRORAactivatesR-2278-2.37391Pr-113
LTBRORAactivatesR-2278-2.37391Pr-113
t(11;14)RORAactivatesR-2278-2.37391Pr-113
RYR1RORAactivatesR-2278-2.37391Pr-113
amp1qRORAactivatesR-2278-2.37391Pr-113
del13RORAactivatesR-2278-2.37391Pr-113
del13RORAactivatesR-2268-2.42558Pr-91
t(11;14)RORArepressesR-2273-2.93425Pr-65
amp1qRORArepressesR-2273-2.93425Pr-65
del13RORArepressesR-2273-2.93425Pr-65
del1pRORArepressesR-2273-2.93425Pr-65
AHNAK2RORArepressesR-22713.11738Pr-138
AHNAK2RORArepressesR-22763.22686Pr-50
t(11;14)RORAactivatesR-2270-3.51482Pr-86
del13RORAactivatesR-2270-3.51482Pr-86
t(11;14)RORAactivatesR-2272-4.24473Pr-134

Genes (104)

MCTP1, RUVBL1, AMIGO3, HSD11B2, RHOG, FLII, TRIML2, RCC2, RAB39A, SEPHS2, ZNF467, ACBD4, SGSH, SHMT2, TRAPPC6B, C16orf72, EWSR1, SELENOF, CSF1, COPB2, ZFP90, TCN2, TARSL2, LMLN, ZBTB3, ZNF829, LAMP1, POLR3C, SESTD1, DCC, PLEKHG7, DPYD, IDO2, ZNF548, NHLRC3, MSANTD1, ARID2, KIAA0408, ZFP92, PAX5, SRGAP3, GDAP2, PDLIM7, HIST1H4C, ZNF785, ZNF786, KLHDC1, ZNF181, MYO1C, ADH5, SIRPA, HIBCH, QRICH1, ASNA1, SPRED2, HLA-DRB5, NCOA6, IPO9, LRIG2, FOXJ3, INPP5F, SELENOT, SPOUT1, PCMTD2, ZNF805, ASPDH, AKT1S1, ZBTB10, CFI, VGLL3, SCAF8, LAT, REPIN1, FBXO16, HAUS3, PPME1, DDX3X, NPEPL1, PPP3R1, C19orf73, TIAF1, PLCXD2, PISD, ARFGAP3, EIF4EBP3, TICAM2, TTC4, PCDHGA12, KIAA1147, THTPA, ZNF559-ZNF177, VBP1, PITX1, HOXD1

Regulons (119)

R-396, R-2169, R-1655, R-642, R-2117, R-1267, R-2764, R-2601, R-1748, R-1705, R-2634, R-172, R-2508, R-1102, R-1707, R-1656, R-1642, R-109, R-1270, R-1933, R-207, R-454, R-1100, R-2607, R-1875, R-57, R-797, R-108, R-1730, R-1741, R-580, R-2659, R-2763, R-944, R-2160, R-100, R-2180, R-2616, R-1769, R-2996, R-1082, R-2500, R-82, R-1310, R-1008, R-1099, R-2435, R-1641, R-380, R-2224, R-2596, R-1643, R-1158, R-1646, R-205, R-899, R-1077, R-516, R-1765, R-2334, R-1066, R-163, R-1376, R-671, R-1281, R-2502, R-2810, R-1582, R-2082, R-3166, R-1004, R-2888, R-822, R-1737, R-1535, R-2748, R-2332, R-2674, R-2614, R-2682, R-1276, R-1639, R-517, R-1732, R-1011, R-1466, R-289, R-2827, R-675, R-549, R-198, R-2841, R-2825, R-2598, R-1307, R-2902, R-515, R-1676, R-103, R-2742, R-1758, R-2229, R-1652, R-1715, R-1058, R-1644, R-1018, R-1653, R-1416, R-2828, R-2670, R-1528, R-446, R-2687, R-520, R-1108, R-1970, R-2513, R-2272

AHNAK2RORArepressesR-22814.95755Pr-70
KDM3BRORArepressesR-22814.95755Pr-70
del13RORArepressesR-22814.95755Pr-70
AHNAK2RORAactivatesR-2277-5.15649Pr-36
MAGI1RORAactivatesR-2277-5.15649Pr-36
t(11;14)RORAactivatesR-2277-5.15649Pr-36

Regulator Causal Mechanistic Flow Network

Cytoscape network of the regulator, with upstream mutations and downstream regulons.

Influences from mutations (magenta chevrons) to this regulator (blue triangles) and then from the regulator to the downstream regulons (red square) are indicated with colored edges. Red-colored edges denote up-regulation or activation while green colored edges represent down-regulation or repression.