Mutation

List of causal flows influenced by the mutation.

Causal Flows are statistically significant links between putative causal events (somatic mutations, copy number variations, chromosomal translocations, etc.) and the activity levels of regulators and regulons. In the causal flow, a mutation may causally activate or deactivate a downstream regulator which then might up- down-regulates a regulon that contains genes with similar expression profiles and binding sites.

Causal Mechanistic Flows for Mutation amp1q

RegulatorRoleRegulonCox Hazard Ratio (Regulon)Transcriptional Programs
DR1up-regulatesR-45-0.00173773Pr-95

Genes (5)

EIF3F, ASB8, NDUFV2, METTL23, GM2A

Regulons (5)

R-45, R-984, R-5, R-1928, R-600

ZFXup-regulatesR-19240.00674942Pr-5
FOXP1up-regulatesR-3140-0.0143587Pr-59
STAT5Aup-regulatesR-2163-0.033622Pr-90
ELK3up-regulatesR-2846-0.0445985Pr-39
SMAD3up-regulatesR-2966-0.0660624Pr-85
ELF3up-regulatesR-21360.0676162Pr-1
FOXJ2up-regulatesR-14290.070253Pr-14
ELK1up-regulatesR-642-0.0732808Pr-134

Genes (104)

MCTP1, RUVBL1, AMIGO3, HSD11B2, RHOG, FLII, TRIML2, RCC2, RAB39A, SEPHS2, ZNF467, ACBD4, SGSH, SHMT2, TRAPPC6B, C16orf72, EWSR1, SELENOF, CSF1, COPB2, ZFP90, TCN2, TARSL2, LMLN, ZBTB3, ZNF829, LAMP1, POLR3C, SESTD1, DCC, PLEKHG7, DPYD, IDO2, ZNF548, NHLRC3, MSANTD1, ARID2, KIAA0408, ZFP92, PAX5, SRGAP3, GDAP2, PDLIM7, HIST1H4C, ZNF785, ZNF786, KLHDC1, ZNF181, MYO1C, ADH5, SIRPA, HIBCH, QRICH1, ASNA1, SPRED2, HLA-DRB5, NCOA6, IPO9, LRIG2, FOXJ3, INPP5F, SELENOT, SPOUT1, PCMTD2, ZNF805, ASPDH, AKT1S1, ZBTB10, CFI, VGLL3, SCAF8, LAT, REPIN1, FBXO16, HAUS3, PPME1, DDX3X, NPEPL1, PPP3R1, C19orf73, TIAF1, PLCXD2, PISD, ARFGAP3, EIF4EBP3, TICAM2, TTC4, PCDHGA12, KIAA1147, THTPA, ZNF559-ZNF177, VBP1, PITX1, HOXD1

Regulons (119)

R-396, R-2169, R-1655, R-642, R-2117, R-1267, R-2764, R-2601, R-1748, R-1705, R-2634, R-172, R-2508, R-1102, R-1707, R-1656, R-1642, R-109, R-1270, R-1933, R-207, R-454, R-1100, R-2607, R-1875, R-57, R-797, R-108, R-1730, R-1741, R-580, R-2659, R-2763, R-944, R-2160, R-100, R-2180, R-2616, R-1769, R-2996, R-1082, R-2500, R-82, R-1310, R-1008, R-1099, R-2435, R-1641, R-380, R-2224, R-2596, R-1643, R-1158, R-1646, R-205, R-899, R-1077, R-516, R-1765, R-2334, R-1066, R-163, R-1376, R-671, R-1281, R-2502, R-2810, R-1582, R-2082, R-3166, R-1004, R-2888, R-822, R-1737, R-1535, R-2748, R-2332, R-2674, R-2614, R-2682, R-1276, R-1639, R-517, R-1732, R-1011, R-1466, R-289, R-2827, R-675, R-549, R-198, R-2841, R-2825, R-2598, R-1307, R-2902, R-515, R-1676, R-103, R-2742, R-1758, R-2229, R-1652, R-1715, R-1058, R-1644, R-1018, R-1653, R-1416, R-2828, R-2670, R-1528, R-446, R-2687, R-520, R-1108, R-1970, R-2513, R-2272

ELF3up-regulatesR-21480.0747421Pr-3
DDIT3up-regulatesR-486-0.0796563Pr-2
CREB1up-regulatesR-2710.0973451Pr-1
FOXJ2up-regulatesR-14360.0974287Pr-41
SREBF1up-regulatesR-11390.101608Pr-7
MEF2Dup-regulatesR-8780.101734Pr-2
TP53down-regulatesR-3630.103829Pr-2
PRDM1up-regulatesR-2081-0.107496Pr-23
STAT3up-regulatesR-308-0.111167Pr-7
ZNF740down-regulatesR-3860.111482Pr-58
NFYCdown-regulatesR-2950.112035Pr-4
TP53down-regulatesR-3760.127114Pr-38
KLF7up-regulatesR-2790.127646Pr-1
FOXJ3up-regulatesR-28790.135462Pr-4
MEF2Aup-regulatesR-18840.142343Pr-23
ENSG00000178860up-regulatesR-11010.142758Pr-53

Genes (1)

MEX3C

Regulons (8)

R-1101, R-1493, R-1913, R-2890, R-673, R-2085, R-2524, R-504

CREB5up-regulatesR-7760.145302Pr-12
HSF2up-regulatesR-3164-0.151939Pr-0
FOXK1up-regulatesR-11950.153559Pr-7
HBP1up-regulatesR-1826-0.154819Pr-1
ATF4up-regulatesR-920.179335Pr-5
TP53down-regulatesR-373-0.181773Pr-130
SPIBup-regulatesR-6620.193889Pr-1
ZNF410up-regulatesR-1940-0.201053Pr-133
MEF2Dup-regulatesR-869-0.203027Pr-6
THRAup-regulatesR-620.204827Pr-117
MEF2Aup-regulatesR-18700.206143Pr-29
GMEB2up-regulatesR-2156-0.237482Pr-0
FOXK1up-regulatesR-1207-0.237776Pr-5
FOXP1up-regulatesR-31370.242409Pr-5
IRF7down-regulatesR-1086-0.243887Pr-41
NFE2L2down-regulatesR-1911-0.246239Pr-2
ELF2up-regulatesR-966-0.257437Pr-37
CEBPGup-regulatesR-436-0.258645Pr-2
POU2F1up-regulatesR-77-0.259838Pr-14
TP53down-regulatesR-372-0.261151Pr-133
ZEB1up-regulatesR-22470.272353Pr-7
ELF2up-regulatesR-9840.272388Pr-95

Genes (5)

EIF3F, ASB8, NDUFV2, METTL23, GM2A

Regulons (5)

R-45, R-984, R-5, R-1928, R-600

POU2F1up-regulatesR-78-0.272418Pr-2
HBP1up-regulatesR-18320.278908Pr-14
NR1H3down-regulatesR-640.29826Pr-6
ARID5Aup-regulatesR-597-0.298346Pr-85
POU2F1up-regulatesR-83-0.310208Pr-41
TFE3up-regulatesR-558-0.31956Pr-39
FOXJ3up-regulatesR-28720.323358Pr-1
EWSR1up-regulatesR-25620.325625Pr-5
KLF4up-regulatesR-27540.332396Pr-7
RORAup-regulatesR-22640.341196Pr-1
FOXK1up-regulatesR-1192-0.353736Pr-0
PBX1up-regulatesR-21150.357421Pr-71
IRF4down-regulatesR-4910.365902Pr-88
CREB1up-regulatesR-2720.366974Pr-2
ZFXup-regulatesR-1927-0.36742Pr-5
HBP1up-regulatesR-18390.37241Pr-23
PAX6down-regulatesR-1545-0.374773Pr-14
ZNF740down-regulatesR-390-0.374881Pr-2
TFE3up-regulatesR-556-0.378688Pr-0
TP53down-regulatesR-369-0.383401Pr-117
SPIBup-regulatesR-6610.39364Pr-85
MEF2Aup-regulatesR-1869-0.397022Pr-2
HBP1up-regulatesR-1831-0.397545Pr-2
ARID5Aup-regulatesR-596-0.400576Pr-1
NFE2L2down-regulatesR-19080.425689Pr-4
MAFKup-regulatesR-2807-0.431065Pr-139
FOXK1up-regulatesR-11900.433468Pr-1
CEBPDdown-regulatesR-1312-0.440834Pr-126
ZFXup-regulatesR-1917-0.446489Pr-6
CREB5up-regulatesR-7750.446924Pr-2
HINFPdown-regulatesR-2624-0.44835Pr-35
ELF2up-regulatesR-9690.451308Pr-13
NFATC2up-regulatesR-1695-0.454371Pr-4
MAFGup-regulatesR-14870.456604Pr-34
FOXP1up-regulatesR-3120-0.467693Pr-6
MAFup-regulatesR-1020.468356Pr-88
CUX1down-regulatesR-12470.479925Pr-88
ZFXup-regulatesR-19280.481402Pr-95

Genes (5)

EIF3F, ASB8, NDUFV2, METTL23, GM2A

Regulons (5)

R-45, R-984, R-5, R-1928, R-600

HINFPdown-regulatesR-2627-0.48712Pr-88
PBX1up-regulatesR-21080.496117Pr-57

Genes (3)

UCP2, ZNF746, IARS

Regulons (3)

R-1059, R-2108, R-2499

CEBPGup-regulatesR-435-0.497945Pr-6
ENSG00000176887up-regulatesR-18990.507358Pr-50
ZFXup-regulatesR-19230.509611Pr-7
PRDM1up-regulatesR-20800.517642Pr-59
FOXJ1up-regulatesR-18490.519757Pr-7
EWSR1up-regulatesR-2541-0.524632Pr-0
E2F2up-regulatesR-2943-0.530398Pr-58
IRF7down-regulatesR-1093-0.530543Pr-46

Genes (3)

RELL1, NCKIPSD, ACAD11

Regulons (3)

R-1093, R-364, R-2171

CEBPGup-regulatesR-440-0.532761Pr-0
FOXJ3up-regulatesR-28930.536867Pr-33
ELF3up-regulatesR-21470.536867Pr-33
PAX6down-regulatesR-1554-0.5394Pr-4
ETV6up-regulatesR-697-0.542759Pr-6
ELF2up-regulatesR-9710.550013Pr-41
NFATC2up-regulatesR-16880.551677Pr-85
BACH1up-regulatesR-4770.551978Pr-23
POU2F1up-regulatesR-690.559914Pr-1
ZNF281up-regulatesR-24740.571768Pr-1
ENSG00000135638up-regulatesR-19580.576875Pr-121

Genes (3)

KPNA2, KIAA0040, ATP6V1E2

Regulons (3)

R-1958, R-1675, R-996

TP53down-regulatesR-3700.58214Pr-7
SMAD3up-regulatesR-2958-0.582936Pr-6
POU2F1up-regulatesR-800.583193Pr-29
FOXP1up-regulatesR-31350.58463Pr-31

Genes (4)

TTC3, ARL4C, GTF2F2, IFRD2

Regulons (4)

R-3135, R-394, R-1836, R-2757

FOXJ3up-regulatesR-2881-0.590232Pr-34
PAX6down-regulatesR-15430.590247Pr-1
HSF1up-regulatesR-540.604731Pr-125
FOXJ2up-regulatesR-14190.60607Pr-1
PRDM1up-regulatesR-20750.612528Pr-14
ELF2up-regulatesR-973-0.61578Pr-135
MEF2Aup-regulatesR-1865-0.617403Pr-6
CEBPGup-regulatesR-4340.620526Pr-1
ELK4up-regulatesR-7710.623476Pr-117
PRDM1up-regulatesR-2088-0.627838Pr-15
PAX6down-regulatesR-1542-0.629177Pr-0
ETV3up-regulatesR-2529-0.631438Pr-58
CEBPGup-regulatesR-4490.634521Pr-8
ZNF281up-regulatesR-2485-0.64174Pr-4
ELF2up-regulatesR-9830.643421Pr-111
THRAup-regulatesR-59-0.644538Pr-30
FOXJ3up-regulatesR-2878-0.651802Pr-14
ELF3up-regulatesR-2141-0.655011Pr-39
NFYCdown-regulatesR-298-0.660463Pr-59
ZNF281up-regulatesR-2472-0.661858Pr-0
MYBup-regulatesR-6150.668149Pr-85
IKZF1up-regulatesR-9930.673265Pr-29
IRF7down-regulatesR-10830.674001Pr-124
FOXJ3up-regulatesR-28890.679009Pr-23
MEF2Dup-regulatesR-8770.682478Pr-55
MEF2Aup-regulatesR-18830.684037Pr-18
CREB5up-regulatesR-777-0.690647Pr-4
TP53down-regulatesR-359-0.690836Pr-1
KLF7up-regulatesR-287-0.699278Pr-28
PEBP1up-regulatesR-1757-0.714169Pr-41
FOXJ2up-regulatesR-1420-0.718874Pr-6
ELF3up-regulatesR-21450.727153Pr-7
FLI1down-regulatesR-786-0.733394Pr-59
CREB1up-regulatesR-269-0.734328Pr-0
PRDM4up-regulatesR-30740.742876Pr-1
BACH2up-regulatesR-28430.746861Pr-7
CREB5up-regulatesR-772-0.748892Pr-0
SMAD3up-regulatesR-2960-0.759716Pr-90
ELF3up-regulatesR-2154-0.760352Pr-12
CREB1up-regulatesR-276-0.764227Pr-10
MAZup-regulatesR-5000.764562Pr-117
FOXJ2up-regulatesR-14310.765091Pr-16
ELF2up-regulatesR-967-0.76768Pr-118
ELK1up-regulatesR-638-0.772695Pr-136
ELK1up-regulatesR-647-0.775241Pr-0
MYBup-regulatesR-619-0.781425Pr-59
TFE3up-regulatesR-557-0.782674Pr-6
ELF3up-regulatesR-2151-0.794443Pr-22
POU2F1up-regulatesR-890.796686Pr-18
CEBPGup-regulatesR-450-0.810406Pr-59
NR1H3down-regulatesR-63-0.820568Pr-0
ELF2up-regulatesR-9820.82189Pr-21
ZFXup-regulatesR-1916-0.823941Pr-0
FOXK1up-regulatesR-1188-0.824193Pr-0
ETV6up-regulatesR-717-0.825555Pr-135
TEAD1up-regulatesR-1213-0.831814Pr-58
PBX1up-regulatesR-2109-0.833545Pr-5
FOXP1up-regulatesR-31360.83863Pr-7
FOXJ3up-regulatesR-2886-0.842981Pr-117
FOXK1up-regulatesR-1198-0.848863Pr-5
ZFXup-regulatesR-19190.849734Pr-16
ELF3up-regulatesR-2135-0.853767Pr-0
NFATC2up-regulatesR-1687-0.857877Pr-0
HSF1up-regulatesR-530.861178Pr-7
EWSR1up-regulatesR-25420.861688Pr-1
DBPdown-regulatesR-2951-0.862874Pr-0
FOXJ3up-regulatesR-2874-0.864638Pr-6
ZNF281up-regulatesR-24940.868452Pr-37
FOXJ3up-regulatesR-2873-0.871109Pr-2
CREB5up-regulatesR-7740.871832Pr-1
CDC5Lup-regulatesR-16300.87323Pr-1
ETV6up-regulatesR-708-0.873811Pr-39
STAT3up-regulatesR-3090.879665Pr-23
RFX1up-regulatesR-25710.881055Pr-7
ELK1up-regulatesR-6410.884722Pr-58
ETV6up-regulatesR-7010.890088Pr-13
MEF2Aup-regulatesR-18790.89332Pr-7
HBP1up-regulatesR-18430.893682Pr-21
ARID5Aup-regulatesR-6010.900146Pr-59
POU2F1up-regulatesR-70-0.911223Pr-6
ZEB1up-regulatesR-22480.912068Pr-8
RORAup-regulatesR-22800.914602Pr-62
FOXJ2up-regulatesR-1430-0.916894Pr-34
TP53down-regulatesR-3710.918717Pr-23
FOXJ2up-regulatesR-14400.926366Pr-18
FOXP1up-regulatesR-3119-0.932927Pr-0
STAT3up-regulatesR-301-0.935216Pr-0
ZNF281up-regulatesR-2493-0.959313Pr-27
SREBF1up-regulatesR-11370.963749Pr-87
NFYCdown-regulatesR-299-0.964307Pr-111
ENSG00000165066down-regulatesR-30800.967824Pr-131
IRF7down-regulatesR-1092-0.976053Pr-40
PAX5down-regulatesR-23740.983647Pr-85
ATF4up-regulatesR-910.985038Pr-24
ZNF740down-regulatesR-3940.989361Pr-31

Genes (4)

TTC3, ARL4C, GTF2F2, IFRD2

Regulons (4)

R-3135, R-394, R-1836, R-2757

FOXJ3up-regulatesR-2870-0.999227Pr-0
MZF1down-regulatesR-3015-1.00106Pr-0
GABPAdown-regulatesR-1456-1.00351Pr-37
POU2F1up-regulatesR-66-1.00411Pr-0
GABPAdown-regulatesR-1454-1.00665Pr-135
HBP1up-regulatesR-18361.00884Pr-31

Genes (4)

TTC3, ARL4C, GTF2F2, IFRD2

Regulons (4)

R-3135, R-394, R-1836, R-2757

ELK1up-regulatesR-6391.02155Pr-13
IRF4down-regulatesR-494-1.0217Pr-40
CREB1up-regulatesR-2751.02424Pr-5
ARID5Aup-regulatesR-595-1.02768Pr-0
VDRdown-regulatesR-12281.0371Pr-87
IRF7down-regulatesR-1090-1.0469Pr-40
MAFKup-regulatesR-28001.04701Pr-13
ARID5Aup-regulatesR-6041.06015Pr-18
TRIM28down-regulatesR-15041.06813Pr-125
TP53down-regulatesR-378-1.06968Pr-39
ELK4up-regulatesR-7681.07813Pr-24
SP1up-regulatesR-27131.08118Pr-87
CEBPGup-regulatesR-433-1.08132Pr-0
SPDEFup-regulatesR-1977-1.08293Pr-97

Genes (5)

THAP5, HMGB1, KPNA5, ATG9A, GLI4

Regulons (5)

R-2187, R-1977, R-1209, R-3026, R-2354

MEF2Aup-regulatesR-18641.08745Pr-1
FOSdown-regulatesR-2190-1.08799Pr-58
DBPdown-regulatesR-29521.09035Pr-14
ZNF740down-regulatesR-381-1.1029Pr-0
FOXP1up-regulatesR-31251.11357Pr-87
EWSR1up-regulatesR-25571.12299Pr-7
SPDEFup-regulatesR-19681.12309Pr-7
FOXJ3up-regulatesR-28841.12637Pr-16
MAFKup-regulatesR-2798-1.12983Pr-0
ELK1up-regulatesR-643-1.13835Pr-117
FOXJ2up-regulatesR-14381.14316Pr-93
FOXJ2up-regulatesR-1437-1.14653Pr-90
FOXJ2up-regulatesR-1418-1.1481Pr-0